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A Comprehensive Survey of Mamba Architectures for Medical Image Analysis: Classification, Segmentation, Restoration and Beyond

2024-10-03 10:23:03
Shubhi Bansal, Sreeharish A, Madhava Prasath J, Manikandan S, Sreekanth Madisetty, Mohammad Zia Ur Rehman, Chandravardhan Singh Raghaw, Gaurav Duggal, Nagendra Kumar

Abstract

Mamba, a special case of the State Space Model, is gaining popularity as an alternative to template-based deep learning approaches in medical image analysis. While transformers are powerful architectures, they have drawbacks, including quadratic computational complexity and an inability to address long-range dependencies efficiently. This limitation affects the analysis of large and complex datasets in medical imaging, where there are many spatial and temporal relationships. In contrast, Mamba offers benefits that make it well-suited for medical image analysis. It has linear time complexity, which is a significant improvement over transformers. Mamba processes longer sequences without attention mechanisms, enabling faster inference and requiring less memory. Mamba also demonstrates strong performance in merging multimodal data, improving diagnosis accuracy and patient outcomes. The organization of this paper allows readers to appreciate the capabilities of Mamba in medical imaging step by step. We begin by defining core concepts of SSMs and models, including S4, S5, and S6, followed by an exploration of Mamba architectures such as pure Mamba, U-Net variants, and hybrid models with convolutional neural networks, transformers, and Graph Neural Networks. We also cover Mamba optimizations, techniques and adaptations, scanning, datasets, applications, experimental results, and conclude with its challenges and future directions in medical imaging. This review aims to demonstrate the transformative potential of Mamba in overcoming existing barriers within medical imaging while paving the way for innovative advancements in the field. A comprehensive list of Mamba architectures applied in the medical field, reviewed in this work, is available at Github.

Abstract (translated)

Mamba,一种 State Space Model 的特殊情况,正在成为医学图像分析中模板为基础的深度学习方法的替代品。尽管 Transformer 是一种强大的架构,但它们存在一些局限性,包括二次计算复杂性和无法有效地解决长距离依赖问题。这种局限性影响到医疗影像大数据的分析,其中存在许多空间和时间关系。相比之下,Mamba 提供了在医学图像分析中具有优势的益处。它具有线性时间复杂性,这是 Transformer 的重大改进。Mamba 在没有注意力机制的情况下处理较长的序列,实现更快的推理并需要更少的内存。Mamba 还展示了在合并多模态数据方面的强大性能,提高诊断准确性和患者 outcomes。本文的组织使读者能够逐步了解 Mamba 在医学影像分析中的能力。我们首先定义了 State Space Model 和模型的核心概念,包括 S4、S5 和 S6,接着探讨了 Mamba 的架构,如纯 Mamba、U-Net 变体和具有卷积神经网络、Transformer 和 Graph Neural Networks 的混合模型。我们还涵盖了 Mamba 的优化、技术和适应性,扫描、数据集、应用、实验结果,并最后结论与挑战及未来在医学影像领域的发展趋势。本综述旨在展示 Mamba 在克服现有医疗影像工作中的障碍的同时,为该领域推动创新进展奠定基础。本工作中回顾了在医学领域应用的 Mamba 架构的完整列表,可在 Github 上查看。

URL

https://arxiv.org/abs/2410.02362

PDF

https://arxiv.org/pdf/2410.02362.pdf


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