Paper Reading AI Learner

Pathology Synthesis of 3D Consistent Cardiac MR Im-ages Using 2D VAEs and GANs

2022-09-09 10:17:49
Sina Amirrajab, Cristian Lorenz, Juergen Weese, Josien Pluim, Marcel Breeuwer

Abstract

We propose a method for synthesizing cardiac MR images with plausible heart shapes and realistic appearances for the purpose of generating labeled data for deep-learning (DL) training. It breaks down the image synthesis into label deformation and label-to-image translation tasks. The former is achieved via latent space interpolation in a VAE model, while the latter is accomplished via a conditional GAN model. We devise an approach for label manipulation in the latent space of the trained VAE model, namely pathology synthesis, aiming to synthesize a series of pseudo-pathological synthetic subjects with characteristics of a desired heart disease. Furthermore, we propose to model the relationship between 2D slices in the latent space of the VAE via estimating the correlation coefficient matrix between the latent vectors and utilizing it to correlate elements of randomly drawn samples before decoding to image space. This simple yet effective approach results in generating 3D consistent subjects from 2D slice-by-slice generations. Such an approach could provide a solution to diversify and enrich the available database of cardiac MR images and to pave the way for the development of generalizable DL-based image analysis algorithms. The code will be available at this https URL.

Abstract (translated)

URL

https://arxiv.org/abs/2209.04223

PDF

https://arxiv.org/pdf/2209.04223.pdf


Tags
3D Action Action_Localization Action_Recognition Activity Adversarial Agent Attention Autonomous Bert Boundary_Detection Caption Chat Classification CNN Compressive_Sensing Contour Contrastive_Learning Deep_Learning Denoising Detection Dialog Diffusion Drone Dynamic_Memory_Network Edge_Detection Embedding Embodied Emotion Enhancement Face Face_Detection Face_Recognition Facial_Landmark Few-Shot Gait_Recognition GAN Gaze_Estimation Gesture Gradient_Descent Handwriting Human_Parsing Image_Caption Image_Classification Image_Compression Image_Enhancement Image_Generation Image_Matting Image_Retrieval Inference Inpainting Intelligent_Chip Knowledge Knowledge_Graph Language_Model Matching Medical Memory_Networks Multi_Modal Multi_Task NAS NMT Object_Detection Object_Tracking OCR Ontology Optical_Character Optical_Flow Optimization Person_Re-identification Point_Cloud Portrait_Generation Pose Pose_Estimation Prediction QA Quantitative Quantitative_Finance Quantization Re-identification Recognition Recommendation Reconstruction Regularization Reinforcement_Learning Relation Relation_Extraction Represenation Represenation_Learning Restoration Review RNN Salient Scene_Classification Scene_Generation Scene_Parsing Scene_Text Segmentation Self-Supervised Semantic_Instance_Segmentation Semantic_Segmentation Semi_Global Semi_Supervised Sence_graph Sentiment Sentiment_Classification Sketch SLAM Sparse Speech Speech_Recognition Style_Transfer Summarization Super_Resolution Surveillance Survey Text_Classification Text_Generation Tracking Transfer_Learning Transformer Unsupervised Video_Caption Video_Classification Video_Indexing Video_Prediction Video_Retrieval Visual_Relation VQA Weakly_Supervised Zero-Shot