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CedarCypress3D: an annotated UAV-LiDAR dataset of individual trees in planted cedar and cypress forests

2026-08-31 02:06:39
Katsuto Shimizu (Shikoku Research Center, Forestry and Forest Products Research Institute), Fumiaki Kitahara (Department of Forest Management, Forestry and Forest Products Research Institute), Tomohiro Nishizono (Department of Forest Management, Forestry and Forest Products Research Institute), Hideki Saito (Forestry and Forest Products Research Institute), Masayoshi Takahashi (Department of Forest Management, Forestry and Forest Products Research Institute), Shingo Obata (Hokkaido Research Center, Forestry and Forest Products Research Institute), Shunsuke Tei (Hokkaido Research Center, Forestry and Forest Products Research Institute), Naoyuki Furuya (Department of Forest Management, Forestry and Forest Products Research Institute), Tomoya Goto (Green Kogyo), Eiji Kodani (Department of Forest Management, Forestry and Forest Products Research Institute), Yusuke Yamada (Graduate School of Bioagricultural Sciences, Nagoya University)

Abstract

Individual tree measurements derived from Light Detection and Ranging (LiDAR) mounted on Unmanned Aerial Vehicles (UAV) provide valuable information for forest inventory, ecosystem monitoring, and sustainable forest management. Recent advancements in machine learning have increased the demand for annotated datasets to develop and evaluate point cloud-based approaches, especially for individual tree segmentation. However, publicly available annotated UAV-LiDAR datasets in temperate forests are limited. In this article, we present CedarCypress3D, a manually annotated UAV-LiDAR dataset collected in Japanese cedar (Cryptomeria japonica) and Japanese cypress (Chamaecyparis obtusa) plantations in Japan. The dataset consists of UAV-LiDAR point clouds and field survey measurements from 34 circular plots across two sites with different topographic characteristics, along with terrestrial LiDAR point clouds available for a subset of 22 plots. A total of 1,627 trees were measured in the census field survey and manually annotated to match the corresponding trees in the UAV-LiDAR point clouds. For the subset of plots with terrestrial LiDAR data, semantic labels (i.e., stem and non-stem) were additionally assigned to tree points in the UAV-LiDAR data. CedarCypress3D provides high-quality annotated UAV-LiDAR data for developing and evaluating individual tree instance segmentation and semantic segmentation methods in temperate planted forests. The dataset can also support research on tree attribute prediction and multi-platform LiDAR analysis. The dataset is publicly available at this https URL.

Abstract (translated)

URL

https://arxiv.org/abs/2608.30149

PDF

https://arxiv.org/pdf/2608.30149.pdf


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